POSA vs HOMSTRAD

Total 399 protein families (each has more than 3 structures)

This table lists the comparison results of POSA against HOMSTRAD alignment (Nov 2004 release). Alignment length and corresponding rmsd are listed for comparison. HOMSTRAD results: click on the len and rmsd to show the alignment file in fasta format and the superimposed-pdb, respectively. POSA results, rigid-len and rigid-rms, flex-len and flex-rms are the alignment length and coresponding rmsd with and without flexibility incorporated, respectively; follow the "link" to check the POSA results.

Family HOMSTRAD POSA
indexnamepdb-num lenrmsd rigid-lenrigid-rmsd flex-lenflex-rmsddetails
1 annexin 6 313 2.02 307 1.68 no flexibility detected link
2 aldosered 7 252 1.59 253 1.65 no flexibility detected link
3 aldose 3 339 1.65 336 0.92 no flexibility detected link
4 adk 9 118 1.98 124 2.05 no flexibility detected link
5 adh 5 370 1.40 361 1.04 no flexibility detected link
6 actin 4 296 3.01 286 2.38 no flexibility detected link
7 ace 6 463 2.93 437 2.57 no flexibility detected link
8 aat 10 337 2.80 320 2.37 no flexibility detected link
9 gpr 3 147 1.49 148 1.61 no flexibility detected link
10 gpdh 8 323 1.43 324 1.29 no flexibility detected link
11 gluts 14 200 1.95 196 1.82 no flexibility detected link
12 glob 41 109 1.78 102 1.65 no flexibility detected link
13 glnasn 4 316 2.52 306 1.11 no flexibility detected link
14 ghf34 3 377 1.79 369 1.71 no flexibility detected link
15 ghf22 12 119 1.36 119 1.31 no flexibility detected link
16 flav 6 133 1.86 133 1.81 no flexibility detected link
17 fkbp 4 107 1.45 107 1.44 no flexibility detected link
18 fer2 13 82 3.97 67 2.21 no flexibility detected link
19 egf 12 27 2.44 27 2.51 no flexibility detected link
20 dhfr 4 155 1.99 149 1.97 no flexibility detected link
21 cytprime 4 119 1.89 118 1.72 no flexibility detected link
22 cyto 3 145 0.99 145 0.99 no flexibility detected link
23 cytc 11 96 1.49 92 1.16 no flexibility detected link
24 cytb 6 75 1.57 75 1.63 no flexibility detected link
25 cyt5 6 69 2.49 69 2.42 no flexibility detected link
26 cyt3 6 90 2.02 92 2.24 no flexibility detected link
27 cys 13 190 1.40 188 1.39 no flexibility detected link
28 cyclo 6 150 1.83 148 1.92 no flexibility detected link
29 csp 3 66 1.19 66 1.16 no flexibility detected link
30 cryst 7 157 11.33 0 0.00 158 1.62 link
31 cpa 4 294 1.75 293 1.34 no flexibility detected link
32 cox 4 423 3.96 378 2.50 no flexibility detected link
33 ccH 4 56 2.34 56 2.30 no flexibility detected link
34 cbp 8 137 12.58 0 0.00 114 2.47 link
35 cat 3 472 1.39 472 1.38 no flexibility detected link
36 cah 5 209 1.66 209 1.55 no flexibility detected link
37 bv 7 84 4.08 87 2.97 no flexibility detected link
38 bowman 5 14 0.69 14 1.40 no flexibility detected link
39 blm 8 248 1.95 245 1.63 no flexibility detected link
40 az 29 72 2.21 67 2.01 no flexibility detected link
41 asp 13 297 1.93 293 1.89 no flexibility detected link
42 mthinb 3 30 2.93 27 2.17 no flexibility detected link
43 mthina 3 31 1.82 31 1.76 no flexibility detected link
44 msb 8 94 6.80 79 1.98 96 2.50 link
45 mmp 6 154 1.11 154 1.03 no flexibility detected link
46 mdd 3 378 1.53 375 1.32 no flexibility detected link
47 ltn 12 202 1.31 202 1.06 no flexibility detected link
48 lipase 5 434 3.40 412 1.16 no flexibility detected link
49 ldh 14 266 2.04 262 1.93 no flexibility detected link
50 kunitz 10 54 2.16 47 1.80 no flexibility detected link
51 kringle 9 74 2.33 70 1.99 no flexibility detected link
52 kinase 15 205 2.56 186 2.48 186 2.88 link
53 kex 3 388 3.10 374 2.50 no flexibility detected link
54 kazal 6 53 2.92 53 2.62 no flexibility detected link
55 intb 6 116 2.25 122 2.35 no flexibility detected link
56 int 5 168 2.94 158 2.46 no flexibility detected link
57 ins 6 43 2.96 42 2.45 no flexibility detected link
58 il8 11 58 4.14 40 2.30 51 2.02 link
59 igvar-l 26 91 1.18 93 1.44 no flexibility detected link
60 igvar-h 21 107 1.22 109 1.32 no flexibility detected link
61 igV 9 71 2.08 75 2.15 no flexibility detected link
62 igps 3 176 2.71 172 2.58 no flexibility detected link
63 igI 9 68 3.32 54 2.40 no flexibility detected link
64 igcon 12 82 2.12 79 2.08 no flexibility detected link
65 igC1 5 89 2.06 89 1.94 no flexibility detected link
66 icd 5 331 2.58 328 2.47 no flexibility detected link
67 hpr 5 84 2.59 71 2.12 no flexibility detected link
68 hom 8 49 1.14 49 1.69 no flexibility detected link
69 hla 5 178 0.81 178 0.81 no flexibility detected link
70 hip 5 55 1.98 53 1.84 no flexibility detected link
71 gtp 8 148 3.16 135 1.97 no flexibility detected link
72 grs 11 262 3.74 197 2.09 no flexibility detected link
73 squash 4 27 2.52 25 2.40 no flexibility detected link
74 sodfe 8 172 2.94 157 1.47 no flexibility detected link
75 sodcu 7 137 1.82 138 1.90 no flexibility detected link
76 slectin 5 125 1.39 126 1.40 no flexibility detected link
77 sh3 20 45 1.40 45 1.60 no flexibility detected link
78 sh2 11 81 2.33 87 2.49 no flexibility detected link
79 serpin 8 335 1.94 334 1.89 no flexibility detected link
80 sermam 27 181 1.45 171 1.22 no flexibility detected link
81 serbact 5 172 1.20 168 1.08 no flexibility detected link
82 seatoxin 5 36 2.75 35 2.39 no flexibility detected link
83 scorptoxin 8 56 2.33 56 2.19 no flexibility detected link
84 rvp 6 94 1.71 93 1.47 no flexibility detected link
85 rub 5 44 0.73 44 0.74 no flexibility detected link
86 rnh 3 114 2.15 112 2.14 no flexibility detected link
87 rnasemam 6 97 2.04 95 2.08 no flexibility detected link
88 ricin 7 234 1.70 233 1.47 no flexibility detected link
89 rhv 6 597 21.93 374 2.45 586 2.12 link
90 rep 4 63 3.03 63 1.99 no flexibility detected link
91 protg 4 55 2.17 55 1.93 no flexibility detected link
92 profilin 5 122 1.63 122 1.52 no flexibility detected link
93 pp 3 36 9.94 19 1.87 no flexibility detected link
94 pot 4 62 2.16 60 2.17 no flexibility detected link
95 porin 4 259 4.28 232 2.63 no flexibility detected link
96 planttoxin 3 42 1.49 41 1.30 no flexibility detected link
97 phoslip 18 111 1.49 110 1.54 no flexibility detected link
98 phero 3 34 1.82 35 1.80 no flexibility detected link
99 peroxidase 5 271 2.39 262 1.91 no flexibility detected link
100 parv 7 106 1.32 103 0.90 no flexibility detected link
101 p450 12 295 2.88 270 2.91 287 2.72 link
102 ngf 4 106 2.08 105 2.04 no flexibility detected link
103 neurotox 3 26 3.93 26 2.28 no flexibility detected link
104 ndk 4 143 1.15 142 1.03 no flexibility detected link
105 mycin 4 107 2.15 104 1.96 no flexibility detected link
106 zf-CCHH 15 23 1.39 24 1.55 no flexibility detected link
107 xia 6 381 1.28 378 1.06 no flexibility detected link
108 uce 13 114 1.73 116 1.87 no flexibility detected link
109 toxin 20 47 3.48 31 2.38 no flexibility detected link
110 tms 5 250 1.61 244 1.50 no flexibility detected link
111 tln 4 273 1.86 270 1.69 no flexibility detected link
112 tim 10 242 1.40 241 1.39 no flexibility detected link
113 thiored 6 67 3.08 64 2.50 no flexibility detected link
114 sugbp 4 265 2.52 254 2.39 no flexibility detected link
115 subt 11 222 2.28 209 2.03 no flexibility detected link
116 rnase 3 100 0.96 99 0.76 no flexibility detected link
117 oat 4 373 2.30 371 2.22 no flexibility detected link
118 mofe 6 410 3.55 388 2.49 394 2.48 link
119 mle 3 339 1.82 330 1.59 no flexibility detected link
120 ltb 3 97 2.81 96 2.18 no flexibility detected link
121 lta 3 183 1.10 176 0.84 no flexibility detected link
122 lipocalin 15 118 2.88 107 2.46 no flexibility detected link
123 ung 3 215 1.35 214 1.24 no flexibility detected link
124 trfl 7 284 1.53 275 2.30 no flexibility detected link
125 thionin 3 45 0.84 45 0.79 no flexibility detected link
126 tgfb 8 55 1.33 57 2.01 no flexibility detected link
127 tbpc 4 175 1.70 176 1.66 no flexibility detected link
128 svmp 3 197 1.23 197 1.21 no flexibility detected link
129 sti 5 145 2.17 144 1.75 no flexibility detected link
130 sdr 13 177 1.98 187 2.11 no flexibility detected link
131 S_100 6 68 3.29 62 2.50 no flexibility detected link
132 rnr 3 264 2.06 267 2.13 no flexibility detected link
133 ptpase 3 262 1.58 260 1.55 no flexibility detected link
134 prt 3 128 3.24 126 2.55 no flexibility detected link
135 ppase 4 166 1.57 161 1.84 no flexibility detected link
136 pnp 3 233 3.34 216 2.56 no flexibility detected link
137 plantltp 5 72 3.13 61 2.27 no flexibility detected link
138 phs 3 781 2.50 763 2.13 no flexibility detected link
139 phc 12 148 3.30 123 1.55 147 1.44 link
140 pgk 4 389 3.46 308 2.95 no flexibility detected link
141 pdc 4 473 3.71 438 2.96 no flexibility detected link
142 cks 3 69 11.77 49 1.72 no flexibility detected link
143 cdh 3 94 2.74 92 2.36 no flexibility detected link
144 cat3 4 199 8.60 170 2.19 192 2.14 link
145 blmb 6 169 3.92 151 2.34 159 2.32 link
146 aabp 3 218 4.71 167 2.70 no flexibility detected link
147 lamb 3 370 3.32 344 1.58 no flexibility detected link
148 hr 5 66 2.56 59 2.21 no flexibility detected link
149 hemopexin 4 182 2.28 176 2.10 no flexibility detected link
150 ghf7 4 353 1.98 336 1.65 no flexibility detected link
151 ghf6 3 276 2.77 270 2.32 no flexibility detected link
152 ghf18 5 211 3.61 159 2.84 no flexibility detected link
153 ghf14 3 393 2.16 386 2.04 no flexibility detected link
154 ghf11 5 174 1.64 169 1.30 no flexibility detected link
155 ghf10 5 281 1.59 287 1.65 no flexibility detected link
156 ghf1 8 266 1.58 262 1.52 no flexibility detected link
157 galpha 3 303 1.96 298 1.65 no flexibility detected link
158 fn3 14 65 2.52 67 2.40 no flexibility detected link
159 ferritin 4 150 1.10 147 0.47 no flexibility detected link
160 fbpase 4 300 1.39 301 1.30 no flexibility detected link
161 fabp 17 122 1.83 123 1.87 no flexibility detected link
162 ets 4 81 2.56 79 2.44 no flexibility detected link
163 ech 3 247 3.23 234 2.03 no flexibility detected link
164 dutpase 3 115 1.87 117 1.90 no flexibility detected link
165 dpo1 4 496 3.71 453 3.02 no flexibility detected link
166 cystatin 3 83 2.76 82 2.59 no flexibility detected link
167 Cu_bind_like 3 90 1.83 89 1.64 no flexibility detected link
168 asprs 3 409 4.17 380 2.58 no flexibility detected link
169 apbact 3 223 2.87 228 2.57 no flexibility detected link
170 ADF 3 129 2.07 131 2.38 no flexibility detected link
171 ACPS 3 97 6.57 73 2.72 94 2.26 link
172 aadh 8 332 3.16 277 2.66 no flexibility detected link
173 Toprim 3 78 3.12 74 2.50 no flexibility detected link
174 TIG 6 79 0.71 80 0.63 no flexibility detected link
175 S4 3 47 1.27 47 1.25 no flexibility detected link
176 Rhodanese 6 104 4.22 101 2.57 no flexibility detected link
177 PA_phosphatase 3 259 3.44 252 2.47 no flexibility detected link
178 Orn_DAP_Arg_deC 3 125 1.09 125 1.40 no flexibility detected link
179 ligase-CoA 3 129 2.66 127 2.38 no flexibility detected link
180 hexapep 3 112 1.34 93 1.72 no flexibility detected link
181 AAA 4 222 5.60 164 3.05 no flexibility detected link
182 B 3 40 2.24 38 1.60 no flexibility detected link
183 AhpC-TSA 3 163 2.37 159 2.15 no flexibility detected link
184 Adenylsucc_synt 3 422 1.37 413 1.17 no flexibility detected link
185 ABC_tran 6 175 4.98 158 2.91 no flexibility detected link
186 BIR 4 82 5.61 71 2.89 no flexibility detected link
187 Glyco_hydro_2 3 80 4.25 71 2.63 no flexibility detected link
188 GBP_PSP 3 23 5.18 17 1.36 no flexibility detected link
189 Fork_head 3 82 3.72 78 2.86 no flexibility detected link
190 FAD-oxidase_NC 4 392 9.68 251 2.72 272 2.61 link
191 FAD-oxidase_C 4 206 11.62 111 2.82 132 2.73 link
192 FAD_binding_4 4 183 2.72 169 2.55 no flexibility detected link
193 ENTH 3 135 6.64 113 1.89 136 1.77 link
194 EF1BD 3 89 3.00 87 2.67 no flexibility detected link
195 DNA_PPF 4 97 4.20 88 2.58 no flexibility detected link
196 DMRL_synthase 5 135 1.68 141 1.88 no flexibility detected link
197 DHOdehase 4 274 3.07 246 2.55 no flexibility detected link
198 DEAD 4 161 6.66 142 2.48 no flexibility detected link
199 DAHP_synth_1 3 240 2.52 229 2.47 no flexibility detected link
200 CPSase_L_chain 4 98 2.87 89 2.49 no flexibility detected link
201 COX3 3 180 1.64 180 1.53 no flexibility detected link
202 chromo 3 54 4.66 48 2.52 no flexibility detected link
203 CBS 4 30 2.26 28 2.21 no flexibility detected link
204 bromodomain 4 103 1.55 102 1.43 no flexibility detected link
205 Bcl-2 3 137 3.78 133 3.10 no flexibility detected link
206 Band_41_NME 3 267 2.04 268 2.07 no flexibility detected link
207 Band_41_N 3 77 1.71 76 2.00 no flexibility detected link
208 Band_41_M 3 101 1.51 102 1.84 no flexibility detected link
209 Bacterial_PQQ 3 537 1.99 535 1.45 no flexibility detected link
210 Bac_rhodopsin 3 210 1.35 209 1.27 no flexibility detected link
211 NADHdh_2 3 230 2.85 230 1.13 no flexibility detected link
212 Mur_ligase_C 3 103 4.25 98 2.67 no flexibility detected link
213 MHC_II_N 13 47 2.29 45 2.32 no flexibility detected link
214 MHC_II_C 8 94 2.50 88 1.68 no flexibility detected link
215 MHC_II_beta_NC 4 178 2.67 176 2.39 no flexibility detected link
216 MHC_II_alpha_NC 4 178 2.04 172 1.82 no flexibility detected link
217 MCR_gamma 3 241 0.84 241 0.83 no flexibility detected link
218 MCR_beta_NC 3 430 0.82 429 0.77 no flexibility detected link
219 MCR_beta_N 3 183 0.91 183 0.91 no flexibility detected link
220 MCR_beta 3 247 0.68 246 0.58 no flexibility detected link
221 MCR_alpha_NC 3 538 0.76 538 0.74 no flexibility detected link
222 MCR_alpha_N 3 263 0.87 263 0.82 no flexibility detected link
223 MCR_alpha 3 275 0.60 275 0.65 no flexibility detected link
224 LuxS 4 134 2.48 137 1.62 no flexibility detected link
225 helicase_NC 3 338 10.55 138 3.16 291 2.59 link
226 helicase_C 5 108 2.81 89 2.34 89 2.96 link
227 RRF 4 175 7.35 106 2.89 177 1.64 link
228 Ribosomal_L7Ae 3 103 3.20 101 2.59 no flexibility detected link
229 Ribosomal_L6_D 4 66 2.63 64 1.87 no flexibility detected link
230 Ribosomal_L1 3 200 6.77 111 1.59 185 1.90 link
231 RGS 4 124 2.55 123 2.14 no flexibility detected link
232 PSI_PsaE 3 61 1.85 61 1.46 no flexibility detected link
233 Pro_CA 4 190 2.26 191 2.35 no flexibility detected link
234 pilin 3 88 5.07 63 3.21 no flexibility detected link
235 oxidored_q6 5 251 0.99 251 0.93 no flexibility detected link
236 NTP_transferase 4 230 2.24 231 2.05 no flexibility detected link
237 NTP_transf_2_2 3 114 2.71 113 2.40 no flexibility detected link
238 NO_synthase 3 310 3.01 300 2.55 no flexibility detected link
239 laminin_G 4 141 2.53 147 2.71 no flexibility detected link
240 WW 4 28 2.47 27 1.48 no flexibility detected link
241 UPF0076 3 123 1.34 123 1.21 no flexibility detected link
242 UCR_TM 3 59 2.11 56 1.97 no flexibility detected link
243 UcrQ 3 77 3.19 75 2.49 no flexibility detected link
244 transket_pyr 3 153 2.24 157 2.22 no flexibility detected link
245 transketolase_PC 3 270 2.77 260 2.55 no flexibility detected link
246 transketolase_C 3 116 2.60 104 2.32 no flexibility detected link
247 TPR 6 83 2.15 98 1.95 98 1.92 link
248 Sulfotransfer 5 189 3.13 161 2.40 no flexibility detected link
249 Propep_M14 4 85 1.55 85 1.28 no flexibility detected link
250 HGTP_anticodon 6 90 1.89 90 1.89 no flexibility detected link
251 Glyco_hydro_18_D2 4 59 1.99 54 1.69 no flexibility detected link
252 Glyco_hydro_18_D1 4 267 2.11 267 1.73 no flexibility detected link
253 Glyco_hydro_18 4 329 1.98 326 2.04 no flexibility detected link
254 chorismate_bind 3 411 3.63 408 2.45 no flexibility detected link
255 tRNA_bind 3 93 2.89 83 2.18 no flexibility detected link
256 RuBisCO_large_N 6 106 1.60 107 1.24 no flexibility detected link
257 RuBisCO_large 7 283 1.79 279 1.58 no flexibility detected link
258 MoCF_biosynth 4 124 2.62 122 2.42 no flexibility detected link
259 HTH_AraC 4 48 1.53 48 1.94 no flexibility detected link
260 DUF170 3 62 3.29 57 2.52 no flexibility detected link
261 DHHA2 3 116 0.82 117 0.82 no flexibility detected link
262 DHH 3 182 0.68 182 0.67 no flexibility detected link
263 Yers_vir_YopE 3 88 1.45 89 1.41 no flexibility detected link
264 RuBisCO_small 7 100 1.02 99 1.30 no flexibility detected link
265 RuBisCO_large_NC 7 389 1.81 387 1.58 no flexibility detected link
266 RNase_HII 3 194 1.47 194 1.58 no flexibility detected link
267 PH 13 55 1.97 66 2.48 no flexibility detected link
268 dCMP_cyt_deam 3 94 2.04 93 1.77 no flexibility detected link
269 Cyclotide 3 21 1.82 20 1.77 no flexibility detected link
270 CBM_20 8 92 1.43 94 1.53 no flexibility detected link
271 Binary_toxA 3 177 2.49 176 2.37 no flexibility detected link
272 HATPase_c 6 131 3.61 120 2.65 no flexibility detected link
273 Fapy_DNA_glyco 4 244 1.78 240 1.60 no flexibility detected link
274 Cyclodex_gly_tran 6 664 1.12 664 1.06 no flexibility detected link
275 Asp_Glu_race_D 4 95 4.47 84 3.18 no flexibility detected link
276 alpha-amylase_NC 23 224 2.67 224 2.30 227 2.19 link
277 alpha-amylase_C 21 29 1.41 34 2.15 no flexibility detected link
278 alpha-amylase 23 201 2.33 193 2.04 194 1.99 link
279 YgbB 3 146 6.60 133 2.36 no flexibility detected link
280 SAP 3 33 1.74 33 1.84 no flexibility detected link
281 response_reg 13 87 2.75 75 2.15 no flexibility detected link
282 GAF 3 127 2.93 123 2.89 no flexibility detected link
283 Cys-protease-3C 3 174 2.33 172 2.17 no flexibility detected link
284 AP_endonuc_2 3 233 3.68 218 3.18 no flexibility detected link
285 toxin_2 21 23 1.80 25 2.24 no flexibility detected link
286 Lum_binding 4 91 2.27 91 2.03 no flexibility detected link
287 FN1 3 42 2.11 42 1.92 no flexibility detected link
288 EGF_Lam 3 44 4.05 40 2.69 no flexibility detected link
289 DISIN 3 43 4.25 34 2.81 no flexibility detected link
290 DEATH 7 74 3.05 76 2.87 no flexibility detected link
291 CUB 3 108 1.59 107 1.46 no flexibility detected link
292 ChtBD 5 39 0.81 40 0.92 no flexibility detected link
293 CH 4 100 3.72 96 2.50 no flexibility detected link
294 C2 3 118 2.07 118 1.88 no flexibility detected link
295 C1 3 46 1.97 46 1.95 no flexibility detected link
296 B_lectin 3 108 0.86 108 0.81 no flexibility detected link
297 ARM 3 391 4.85 320 2.68 no flexibility detected link
298 ANK 3 119 2.00 120 1.81 no flexibility detected link
299 ALBUMIN 3 185 4.99 152 3.23 no flexibility detected link
300 UBQ 3 73 0.71 73 0.71 no flexibility detected link
301 TRANSTHYRETIN 3 114 1.14 114 1.13 no flexibility detected link
302 THAUMATIN 3 199 1.19 199 1.10 no flexibility detected link
303 RING 3 50 6.17 31 3.57 no flexibility detected link
304 PTB 3 111 3.30 102 2.78 no flexibility detected link
305 PDZ 6 81 2.20 80 2.07 no flexibility detected link
306 PAS 3 99 2.40 99 2.31 no flexibility detected link
307 P 3 47 3.66 44 1.67 no flexibility detected link
308 LMWPc 3 155 1.55 152 0.99 no flexibility detected link
309 LIM 5 58 4.21 55 3.53 no flexibility detected link
310 LDLa 4 35 2.53 36 2.68 no flexibility detected link
311 KISc 4 293 2.68 289 2.10 no flexibility detected link
312 GLA 4 34 3.37 31 2.56 no flexibility detected link
313 GEL 5 83 2.82 82 2.62 no flexibility detected link
314 GAL4 3 33 1.16 33 1.18 no flexibility detected link
315 EF_TS 3 66 7.89 61 1.60 no flexibility detected link
316 E2_C 3 71 1.32 71 0.87 no flexibility detected link
317 COX2 3 113 1.14 114 1.18 no flexibility detected link
318 Bac_DNA_binding 4 71 1.89 71 1.97 no flexibility detected link
319 ATP-gua_Ptrans 3 340 2.98 338 2.26 no flexibility detected link
320 Antifreeze 3 64 1.22 63 1.07 no flexibility detected link
321 Stap_Strp_toxin 6 172 2.47 157 2.15 no flexibility detected link
322 rrm 20 57 2.17 56 2.22 no flexibility detected link
323 recombinase 3 40 4.68 37 2.52 no flexibility detected link
324 Phage_integrase 4 126 3.95 104 3.00 115 2.92 link
325 PGAM 3 184 2.53 183 2.46 no flexibility detected link
326 Peptidase_S21 3 186 2.31 169 1.39 no flexibility detected link
327 OTCace 5 278 2.11 278 2.00 no flexibility detected link
328 Nitroreductase 3 174 2.80 161 2.15 no flexibility detected link
329 NiFeSe_Hases 3 529 0.85 529 0.82 no flexibility detected link
330 MIF 3 114 0.90 114 0.89 no flexibility detected link
331 HMG_box 5 65 4.14 63 3.36 no flexibility detected link
332 HLH 5 57 3.93 25 2.39 46 2.23 link
333 ghf5 6 225 3.15 215 2.72 no flexibility detected link
334 GATA 3 43 2.45 44 2.27 no flexibility detected link
335 Extradiol_dioxy 3 269 2.39 268 2.11 no flexibility detected link
336 Epimerase 4 273 3.32 257 2.51 no flexibility detected link
337 biotin_lipoyl 7 71 2.71 64 2.73 no flexibility detected link
338 bac_luciferase 4 212 5.43 196 2.37 no flexibility detected link
339 aldedh 4 420 2.09 411 1.87 no flexibility detected link
340 acid_phosphat 3 318 4.48 276 2.56 no flexibility detected link
341 tryp_alpha_amyl 3 100 3.31 94 2.00 no flexibility detected link
342 tRNA-synt_2b 5 210 2.95 205 2.58 no flexibility detected link
343 SRF-TF 3 71 3.36 65 1.86 no flexibility detected link
344 pec_lyase 4 267 4.91 253 2.49 no flexibility detected link
345 myb_DNA-binding 5 45 3.27 43 2.63 no flexibility detected link
346 molybdopterin 4 638 4.11 537 2.40 no flexibility detected link
347 lacI 3 50 2.68 48 2.40 no flexibility detected link
348 inositol_P 3 244 4.82 207 2.64 no flexibility detected link
349 Haloperoxidase 9 232 3.12 204 2.59 no flexibility detected link
350 cyclin 3 219 6.31 192 2.91 208 2.85 link
351 lyase_1 5 366 3.10 361 2.57 no flexibility detected link
352 LRR 3 318 2.45 318 2.52 no flexibility detected link
353 Lipase_3 3 253 1.76 251 1.83 no flexibility detected link
354 Levi_coat 4 115 2.60 102 1.86 no flexibility detected link
355 hormone_rec 5 192 4.37 190 2.86 no flexibility detected link
356 HMA 3 68 2.34 68 2.23 no flexibility detected link
357 histone 4 68 2.67 67 2.58 no flexibility detected link
358 hexokinase 3 434 2.49 432 2.43 no flexibility detected link
359 GATase_2 3 224 3.75 216 2.00 no flexibility detected link
360 GATase 3 172 2.01 166 1.88 no flexibility detected link
361 Filamin 3 88 9.45 79 2.66 no flexibility detected link
362 fibrinogen_C 3 194 1.40 192 1.32 no flexibility detected link
363 Cu_amine_oxid 4 587 1.87 589 1.97 no flexibility detected link
364 cpn60_TCP1 4 122 2.38 115 2.61 no flexibility detected link
365 citrate_synt 3 349 1.94 350 2.07 no flexibility detected link
366 Acetyltransf 6 105 2.78 113 2.68 no flexibility detected link
367 TNF 5 131 1.84 128 1.72 no flexibility detected link
368 TMV_coat 4 152 2.78 147 2.52 no flexibility detected link
369 reductases 7 194 2.77 194 2.69 no flexibility detected link
370 proteasome 17 148 2.19 148 1.95 no flexibility detected link
371 PK 4 451 3.54 392 2.27 no flexibility detected link
372 Peptidase_M24 4 204 3.32 188 2.22 no flexibility detected link
373 Cys_Met_Meta_PP 3 372 2.49 360 1.79 no flexibility detected link
374 Cu_nir 3 332 0.56 332 0.56 no flexibility detected link
375 CPS 3 187 6.28 148 2.61 no flexibility detected link
376 ATP-synt 4 435 3.64 415 3.10 no flexibility detected link
377 Ald_Xan_dh_2 6 665 2.14 664 2.11 no flexibility detected link
378 Ald_Xan_dh_1 6 144 1.49 145 1.48 no flexibility detected link
379 TyrKc 7 232 2.47 227 2.26 no flexibility detected link
380 tRNA-synt_1 3 464 4.46 445 2.83 no flexibility detected link
381 TIL 4 54 4.07 41 3.46 no flexibility detected link
382 Sm 4 63 1.50 63 1.44 no flexibility detected link
383 SBP_bacterial_1 3 298 3.23 250 2.50 no flexibility detected link
384 PEP-utilizers 3 101 3.02 97 2.34 no flexibility detected link
385 MMOB 3 85 6.90 35 2.66 63 2.88 link
386 MM_CoA_mutase 4 127 4.53 100 3.24 no flexibility detected link
387 Methyltransf_1 3 145 4.00 127 2.31 no flexibility detected link
388 leukocidin 3 264 11.73 235 1.77 254 1.68 link
389 KAS 6 302 2.42 305 2.38 no flexibility detected link
390 Invasin 3 88 2.06 88 2.01 no flexibility detected link
391 Huristasin 3 47 6.27 31 2.45 no flexibility detected link
392 ghf33 4 289 2.54 273 2.56 no flexibility detected link
393 EFTU_C 3 93 0.97 93 0.96 no flexibility detected link
394 EFTU_2 4 86 1.54 86 1.48 no flexibility detected link
395 dsrm 3 67 2.43 67 2.57 no flexibility detected link
396 DNA_pol3_beta 3 106 2.25 107 2.07 no flexibility detected link
397 cbm12 3 39 2.16 37 1.78 no flexibility detected link
398 CBD_3 3 135 2.76 132 2.46 no flexibility detected link
399 adeno_fiber 3 178 2.15 170 1.87 no flexibility detected link

POSA has detected flexibility in comparing 27 families (the corresponding index is highlighted in red).

The alignments of POSA compared to HOMSTRAD (average over 399 families):
average((POSA-alignment-len - HOMSTRAD-alignment-len)/HOMSTRAD-alignment-len) = -0.040;
average(POSA-alignment-rmsd - HOMSTRAD-alignment-rmsd) = -0.797.

The alignments of POSA compared to HOMSTRAD (average over 372 families, excluding alignments with flexibility):
average((POSA-alignment-len - HOMSTRAD-alignment-len)/HOMSTRAD-alignment-len) = -0.038;
average(POSA-alignment-rmsd - HOMSTRAD-alignment-rmsd) = -0.528.