TOPS++FATCAT Home Database Searching References Help FATCAT Godzik Lab

References:

  1. Mallika Veeramalai, Yuzhen Ye and Adam Godzik. "TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model" BMC Bioinformatics , 9:358, 2008. PubMed
  2. Yuzhen Ye and Adam Godzik. "Flexible structure alignment by chaining aligned fragment pairs allowing twists"  Bioinformatics , 19(Suppl. 2):ii246-ii255, 2003. PubMed
  3. Mallika Veeramalai and David Gilbert. "A Novel Method for Comparing Topological Models of Protein Structures Enhanced with Ligand Information" Bioinformatics, (2008) [Paper] [TOPS+ Server]






TOPS++FATCAT Reference: Mallika Veeramalai, Yuzhen Ye and Adam Godzik. "TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model" BMC Bioinformatics ,9:358, 2008.

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This research was supported by NIH grant P20 GM076221 JCMM (Joint Center for Molecular Modeling)